Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Gm5866-201ENSMUST00000177881 973 ntBASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Gm44608-201ENSMUST00000206827 855 ntBASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Gm7063-201ENSMUST00000186840 981 ntBASIC14.34□□□□□ -0.11
Vps28Q9D1C8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Gm20445-201ENSMUST00000061905 565 ntBASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps28Q9D1C8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vps28Q9D1C8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm12585-201ENSMUST00000117307 290 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm24694-201ENSMUST00000180054 110 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm27663-201ENSMUST00000184839 110 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm29667-201ENSMUST00000190817 490 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm7730-201ENSMUST00000212486 454 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
Vps28Q9D1C8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms