Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Gm43347-201ENSMUST00000200226 580 ntBASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1lQ9CXF7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Gm34391-201ENSMUST00000203706 907 ntBASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1lQ9CXF7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1lQ9CXF7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms