Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1aQ9CU62 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Gm13015-201ENSMUST00000118674 204 ntBASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Gm29541-201ENSMUST00000191351 678 ntBASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.68■□□□□ 0.1
Smc1aQ9CU62 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1aQ9CU62 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gm14767-201ENSMUST00000121559 586 ntBASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gm2423-201ENSMUST00000074863 733 ntBASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.67■□□□□ 0.1
Smc1aQ9CU62 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Gm28630-201ENSMUST00000187806 498 ntBASIC15.66■□□□□ 0.1
Smc1aQ9CU62 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1aQ9CU62 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms