Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm7Q9CQQ8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm13385-201ENSMUST00000121089 220 ntBASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm12134-201ENSMUST00000122109 520 ntBASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm7653-201ENSMUST00000214567 508 ntBASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm6180-201ENSMUST00000065243 498 ntBASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm7Q9CQQ8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm8584-201ENSMUST00000171982 758 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm24420-201ENSMUST00000176676 59 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm8927-201ENSMUST00000181978 981 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm3222-201ENSMUST00000071282 990 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.1□□□□□ -0.15
Lsm7Q9CQQ8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm7Q9CQQ8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms