Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm12882-201ENSMUST00000121696 517 ntBASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.79□□□□□ -0.2
Nipsnap3bQ9CQE1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm14494-201ENSMUST00000118786 435 ntBASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nipsnap3bQ9CQE1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nipsnap3bQ9CQE1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm11779-201ENSMUST00000118541 368 ntBASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm11745-201ENSMUST00000121669 448 ntBASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms