Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mir8098-201ENSMUST00000184011 137 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 AV026068-213ENSMUST00000223675 1171 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Mzt1-203ENSMUST00000227948 952 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Gm13884-201ENSMUST00000118103 829 ntBASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Grk6-205ENSMUST00000224653 2976 ntBASIC12.62□□□□□ -0.39
Krt88Q9CPR6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt88Q9CPR6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms