Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh15Q99PJ1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Gm18212-201ENSMUST00000211678 889 ntBASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Gm19208-201ENSMUST00000213861 912 ntBASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.46■□□□□ 0.07
Pcdh15Q99PJ1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh15Q99PJ1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh15Q99PJ1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh15Q99PJ1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh15Q99PJ1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh15Q99PJ1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm13461-201ENSMUST00000120980 662 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm9083-201ENSMUST00000120423 819 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm25043-201ENSMUST00000158604 212 ntBASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh15Q99PJ1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms