Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm15371-201ENSMUST00000117057 784 ntBASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Gm38241-201ENSMUST00000192641 898 ntBASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Gm43822-201ENSMUST00000200285 476 ntBASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Gm9823-201ENSMUST00000051212 327 ntBASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.08□□□□□ -0.31
Nkx6-1Q99MA9 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.08□□□□□ -0.31
Nkx6-1Q99MA9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx6-1Q99MA9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx6-1Q99MA9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm12485-201ENSMUST00000119641 291 ntBASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm8927-201ENSMUST00000181978 981 ntBASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm3222-201ENSMUST00000071282 990 ntBASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx6-1Q99MA9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm16177-201ENSMUST00000120728 718 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm18056-201ENSMUST00000207670 568 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm18061-201ENSMUST00000208350 562 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm18063-201ENSMUST00000208529 568 ntBASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm18052-201ENSMUST00000208750 559 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms