Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf1Q99LC2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Gm5187-201ENSMUST00000117317 991 ntBASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf1Q99LC2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cstf1Q99LC2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cstf1Q99LC2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.96□□□□□ -0.18
Cstf1Q99LC2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm12384-201ENSMUST00000119228 919 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm27243-201ENSMUST00000183964 521 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm18905-201ENSMUST00000205454 928 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm6013-201ENSMUST00000212264 699 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cstf1Q99LC2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms