Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Gm11745-201ENSMUST00000121669 448 ntBASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac1Q91Y10 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac1Q91Y10 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gm10275-202ENSMUST00000168697 495 ntBASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gm27920-201ENSMUST00000183953 96 ntBASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gm10275-201ENSMUST00000092620 635 ntBASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac1Q91Y10 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
Pcdhac1Q91Y10 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac1Q91Y10 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Pcdhac1Q91Y10 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac1Q91Y10 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac1Q91Y10 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac1Q91Y10 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhac1Q91Y10 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac1Q91Y10 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms