Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm19030-201ENSMUST00000194947 552 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm37490-201ENSMUST00000195566 724 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm8920-201ENSMUST00000196153 924 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm14481-201ENSMUST00000117178 629 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm13223-201ENSMUST00000118609 747 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm4207-201ENSMUST00000173144 960 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm27039-201ENSMUST00000182438 962 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb20Q91XZ9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm12978-201ENSMUST00000121250 522 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm13792-201ENSMUST00000121350 423 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm27306-201ENSMUST00000183970 107 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm42430-201ENSMUST00000197209 616 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm42591-201ENSMUST00000197249 700 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm20949-201ENSMUST00000206478 952 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Carlr-201ENSMUST00000181515 2574 ntBASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms