Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps36Q91XD6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps36Q91XD6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps36Q91XD6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps36Q91XD6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps36Q91XD6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps36Q91XD6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.12■□□□□ 0.01
Vps36Q91XD6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.12■□□□□ 0.01
Vps36Q91XD6 Chchd1-203ENSMUST00000224633 557 ntBASIC15.12■□□□□ 0.01
Vps36Q91XD6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.12■□□□□ 0.01
Vps36Q91XD6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps36Q91XD6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.11■□□□□ 0.01
Vps36Q91XD6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Vps36Q91XD6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Gm29541-201ENSMUST00000191351 678 ntBASIC15.11■□□□□ 0.01
Vps36Q91XD6 Gm5312-201ENSMUST00000203728 547 ntBASIC15.11■□□□□ 0.01
Vps36Q91XD6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Gm18027-201ENSMUST00000218947 619 ntBASIC15.11■□□□□ 0.01
Vps36Q91XD6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps36Q91XD6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.1■□□□□ 0.01
Vps36Q91XD6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.1■□□□□ 0.01
Vps36Q91XD6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.1■□□□□ 0.01
Vps36Q91XD6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps36Q91XD6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps36Q91XD6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps36Q91XD6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms