Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp3Q91W36 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Gm28760-201ENSMUST00000185995 736 ntBASIC14.4□□□□□ -0.1
Usp3Q91W36 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp3Q91W36 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp3Q91W36 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Usp3Q91W36 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp3Q91W36 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp3Q91W36 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp3Q91W36 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp3Q91W36 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.39□□□□□ -0.11
Usp3Q91W36 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.39□□□□□ -0.11
Usp3Q91W36 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.39□□□□□ -0.11
Usp3Q91W36 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.39□□□□□ -0.11
Usp3Q91W36 Gm37436-201ENSMUST00000193842 1085 ntBASIC14.39□□□□□ -0.11
Usp3Q91W36 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.39□□□□□ -0.11
Usp3Q91W36 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp3Q91W36 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp3Q91W36 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.38□□□□□ -0.11
Usp3Q91W36 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Gm12859-201ENSMUST00000117834 427 ntBASIC14.38□□□□□ -0.11
Usp3Q91W36 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Gm18351-201ENSMUST00000188646 883 ntBASIC14.38□□□□□ -0.11
Usp3Q91W36 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.38□□□□□ -0.11
Usp3Q91W36 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp3Q91W36 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp3Q91W36 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.37□□□□□ -0.11
Usp3Q91W36 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Gm45696-201ENSMUST00000212088 985 ntBASIC14.37□□□□□ -0.11
Usp3Q91W36 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 AC106830.1-201ENSMUST00000228032 1003 ntBASIC14.37□□□□□ -0.11
Usp3Q91W36 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Mir497b-201ENSMUST00000093601 125 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms