Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Gm6218-201ENSMUST00000219812 628 ntBASIC16.08■□□□□ 0.16
Ddx41Q91VN6 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Gm9229-201ENSMUST00000222777 126 ntBASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx41Q91VN6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 BC001981-202ENSMUST00000191393 1545 ntBASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Mir125a-201ENSMUST00000083545 68 ntBASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx41Q91VN6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gm10275-202ENSMUST00000168697 495 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 AA619741-201ENSMUST00000195095 646 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gm20445-201ENSMUST00000061905 565 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Gm10275-201ENSMUST00000092620 635 ntBASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms