Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm25990-201ENSMUST00000102440 86 ntBASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm16026-204ENSMUST00000162652 683 ntBASIC12.04□□□□□ -0.48
Tram1Q91V04 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tram1Q91V04 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.04□□□□□ -0.48
Tram1Q91V04 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.04□□□□□ -0.48
Tram1Q91V04 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tram1Q91V04 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.03□□□□□ -0.48
Tram1Q91V04 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.03□□□□□ -0.48
Tram1Q91V04 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.03□□□□□ -0.48
Tram1Q91V04 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tram1Q91V04 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tram1Q91V04 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tram1Q91V04 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tram1Q91V04 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tram1Q91V04 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tram1Q91V04 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tram1Q91V04 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms