Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H1fooQ8VIK3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 AA619741-201ENSMUST00000195095 646 ntBASIC11.73□□□□□ -0.53
H1fooQ8VIK3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Acot6-202ENSMUST00000222921 3622 ntBASIC11.73□□□□□ -0.53
H1fooQ8VIK3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.73□□□□□ -0.53
H1fooQ8VIK3 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H1fooQ8VIK3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Gm43474-201ENSMUST00000196415 774 ntBASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Gm44608-201ENSMUST00000206827 855 ntBASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H1fooQ8VIK3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H1fooQ8VIK3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H1fooQ8VIK3 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.71□□□□□ -0.53
H1fooQ8VIK3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H1fooQ8VIK3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms