Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Gm27701-201ENSMUST00000184498 110 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Mir7654-201ENSMUST00000185082 70 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Mir497b-201ENSMUST00000093601 125 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx39aQ8VDW0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Gm15806-201ENSMUST00000120696 955 ntBASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx39aQ8VDW0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx39aQ8VDW0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms