Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AA543401-201ENSMUST00000164248 1269 ntBASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Gm45453-201ENSMUST00000211758 853 ntBASIC13.43□□□□□ -0.26
Lsm1Q8VC85 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm1Q8VC85 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm4995-201ENSMUST00000117247 432 ntBASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm13365-201ENSMUST00000121188 973 ntBASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm27631-201ENSMUST00000184163 466 ntBASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm18049-201ENSMUST00000208909 581 ntBASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm1Q8VC85 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Mir1895-201ENSMUST00000122615 79 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Gm8000-201ENSMUST00000188378 592 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Gm44771-201ENSMUST00000206975 626 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms