Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp7Q8R1T1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp7Q8R1T1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Snora78-201ENSMUST00000158630 128 ntBASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp7Q8R1T1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Gm13612-201ENSMUST00000119276 390 ntBASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Gm14660-201ENSMUST00000119809 575 ntBASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Gm29649-201ENSMUST00000185649 419 ntBASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp7Q8R1T1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms