Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.57■□□□□ 0.24
Cchcr1Q8K2I2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Gm5566-201ENSMUST00000116118 459 ntBASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Gm43125-201ENSMUST00000201724 730 ntBASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cchcr1Q8K2I2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cchcr1Q8K2I2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Gm4995-201ENSMUST00000117247 432 ntBASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Gm9719-201ENSMUST00000162765 543 ntBASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cchcr1Q8K2I2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm18766-201ENSMUST00000189811 808 ntBASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms