Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Gm24543-201ENSMUST00000103867 82 ntBASIC14.31□□□□□ -0.12
CopaQ8CIE6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Gm5866-201ENSMUST00000177881 973 ntBASIC14.31□□□□□ -0.12
CopaQ8CIE6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.31□□□□□ -0.12
CopaQ8CIE6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Gm8749-201ENSMUST00000117737 331 ntBASIC14.3□□□□□ -0.12
CopaQ8CIE6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Gm2423-201ENSMUST00000074863 733 ntBASIC14.3□□□□□ -0.12
CopaQ8CIE6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Matn2-206ENSMUST00000228570 2798 ntBASIC14.3□□□□□ -0.12
CopaQ8CIE6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopaQ8CIE6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm15487-201ENSMUST00000122373 465 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm29310-201ENSMUST00000185468 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21825-201ENSMUST00000185728 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm29109-201ENSMUST00000185895 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21896-201ENSMUST00000186520 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21873-201ENSMUST00000186728 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21794-201ENSMUST00000187056 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21880-201ENSMUST00000187275 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21826-201ENSMUST00000187451 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21198-201ENSMUST00000188393 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21749-201ENSMUST00000189343 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21901-201ENSMUST00000189568 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm29424-201ENSMUST00000189716 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm28599-201ENSMUST00000189838 694 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21867-201ENSMUST00000189917 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm29269-201ENSMUST00000190087 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21722-201ENSMUST00000190153 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm28423-201ENSMUST00000190701 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21899-201ENSMUST00000190745 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21910-201ENSMUST00000191163 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21849-201ENSMUST00000191571 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm28678-201ENSMUST00000191593 696 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms