Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Gm15371-201ENSMUST00000117057 784 ntBASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.06■□□□□ 0.48
Rab11fip3Q8CHD8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip3Q8CHD8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Gm27892-201ENSMUST00000185017 106 ntBASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip3Q8CHD8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Gm15376-201ENSMUST00000122258 783 ntBASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Mir1894-201ENSMUST00000122802 81 ntBASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Gm44719-201ENSMUST00000206404 149 ntBASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Gm5356-201ENSMUST00000093326 615 ntBASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip3Q8CHD8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms