Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.3■□□□□ 0.36
Smc5Q8CG46 Gm29741-201ENSMUST00000192667 421 ntBASIC17.3■□□□□ 0.36
Smc5Q8CG46 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.3■□□□□ 0.36
Smc5Q8CG46 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.3■□□□□ 0.36
Smc5Q8CG46 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc5Q8CG46 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Gm11779-201ENSMUST00000118541 368 ntBASIC17.29■□□□□ 0.36
Smc5Q8CG46 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.29■□□□□ 0.36
Smc5Q8CG46 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Gm18027-201ENSMUST00000218947 619 ntBASIC17.29■□□□□ 0.36
Smc5Q8CG46 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc5Q8CG46 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Gm14494-201ENSMUST00000118786 435 ntBASIC17.28■□□□□ 0.36
Smc5Q8CG46 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc5Q8CG46 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.27■□□□□ 0.36
Smc5Q8CG46 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.27■□□□□ 0.36
Smc5Q8CG46 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Gm29541-201ENSMUST00000191351 678 ntBASIC17.27■□□□□ 0.36
Smc5Q8CG46 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.27■□□□□ 0.36
Smc5Q8CG46 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Mir125a-201ENSMUST00000083545 68 ntBASIC17.27■□□□□ 0.36
Smc5Q8CG46 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc5Q8CG46 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Smc5Q8CG46 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.27■□□□□ 0.35
Smc5Q8CG46 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc5Q8CG46 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc5Q8CG46 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms