Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gm11745-201ENSMUST00000121669 448 ntBASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc87Q8CDL9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Rprl2-201ENSMUST00000157150 290 ntBASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc87Q8CDL9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Gm13365-201ENSMUST00000121188 973 ntBASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms