Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rft1Q8C3B8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rft1Q8C3B8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rft1Q8C3B8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.51□□□□□ -0.41
Rft1Q8C3B8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rft1Q8C3B8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Mir1895-201ENSMUST00000122615 79 ntBASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gm11025-201ENSMUST00000140773 466 ntBASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gm27494-201ENSMUST00000184735 189 ntBASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rft1Q8C3B8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Rpph1-201ENSMUST00000175096 319 ntBASIC12.49□□□□□ -0.41
Rft1Q8C3B8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms