Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp44Q8C2S0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Gm24694-201ENSMUST00000180054 110 ntBASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Gm27663-201ENSMUST00000184839 110 ntBASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Usp44Q8C2S0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Gm24420-201ENSMUST00000176676 59 ntBASIC16.34■□□□□ 0.21
Usp44Q8C2S0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Syt7-204ENSMUST00000223586 1344 ntBASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp44Q8C2S0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp44Q8C2S0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp44Q8C2S0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.33■□□□□ 0.21
Usp44Q8C2S0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp44Q8C2S0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp44Q8C2S0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp44Q8C2S0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Gm22189-201ENSMUST00000103822 86 ntBASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Gm20445-201ENSMUST00000061905 565 ntBASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms