Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Gm15460-201ENSMUST00000118147 391 ntBASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Gm29741-201ENSMUST00000192667 421 ntBASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.44□□□□□ -0.1
Trub1Q8C0D0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm13616-201ENSMUST00000120600 222 ntBASIC14.43□□□□□ -0.1
Trub1Q8C0D0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm9229-201ENSMUST00000222777 126 ntBASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trub1Q8C0D0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Gm6888-201ENSMUST00000221983 706 ntBASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms