Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Gm13616-201ENSMUST00000120600 222 ntBASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Gm38225-201ENSMUST00000194001 393 ntBASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trerf1Q8BXJ2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Mir449b-201ENSMUST00000104833 80 ntBASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trerf1Q8BXJ2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gm10253-201ENSMUST00000194270 940 ntBASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms