Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp43Q8BUM9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Gm21470-201ENSMUST00000187680 696 ntBASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Gm43703-201ENSMUST00000200523 763 ntBASIC14.17□□□□□ -0.14
Usp43Q8BUM9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp43Q8BUM9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp43Q8BUM9 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm3436-201ENSMUST00000179930 840 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms