Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Gm17795-201ENSMUST00000214505 757 ntBASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup54Q8BTS4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Mir698-201ENSMUST00000102164 109 ntBASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup54Q8BTS4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Gm24420-201ENSMUST00000176676 59 ntBASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Gm18905-201ENSMUST00000205454 928 ntBASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.29□□□□□ -0.12
Nup54Q8BTS4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms