Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc40Q8BI79 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Paupar-201ENSMUST00000194826 3482 ntBASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc40Q8BI79 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm25287-201ENSMUST00000103846 110 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm22918-201ENSMUST00000103855 110 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm11594-201ENSMUST00000122313 162 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm24513-201ENSMUST00000174964 138 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm2213-201ENSMUST00000197485 688 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.62□□□□□ -0.07
Ccdc40Q8BI79 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc40Q8BI79 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms