Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim6Q8BGE7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim6Q8BGE7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim6Q8BGE7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Gm12350-201ENSMUST00000121208 462 ntBASIC14.86□□□□□ -0.03
Trim6Q8BGE7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trim6Q8BGE7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim6Q8BGE7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim6Q8BGE7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim6Q8BGE7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim6Q8BGE7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms