Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.83□□□□□ -0.2
Ubp1Q811S7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Ubp1Q811S7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm27989-201ENSMUST00000184721 107 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm20949-201ENSMUST00000206478 952 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.82□□□□□ -0.2
Ubp1Q811S7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubp1Q811S7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ubp1Q811S7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Auts2-212ENSMUST00000178555 309 ntBASIC13.81□□□□□ -0.2
Ubp1Q811S7 Gm27680-201ENSMUST00000184192 160 ntBASIC13.81□□□□□ -0.2
Ubp1Q811S7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.81□□□□□ -0.2
Ubp1Q811S7 Gm9063-201ENSMUST00000223299 582 ntBASIC13.81□□□□□ -0.2
Ubp1Q811S7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.81□□□□□ -0.2
Ubp1Q811S7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.81□□□□□ -0.2
Ubp1Q811S7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubp1Q811S7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms