Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim50Q810I2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.66□□□□□ -0.22
Trim50Q810I2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.65□□□□□ -0.22
Trim50Q810I2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim50Q810I2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim50Q810I2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Gm15920-201ENSMUST00000118998 402 ntBASIC13.64□□□□□ -0.23
Trim50Q810I2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Gm6916-202ENSMUST00000205523 195 ntBASIC13.64□□□□□ -0.23
Trim50Q810I2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.64□□□□□ -0.23
Trim50Q810I2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.64□□□□□ -0.23
Trim50Q810I2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trim50Q810I2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim50Q810I2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trim50Q810I2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim50Q810I2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Gm15653-201ENSMUST00000119247 907 ntBASIC13.63□□□□□ -0.23
Trim50Q810I2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim50Q810I2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms