Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm8762-201ENSMUST00000193486 339 ntBASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Gm18753-201ENSMUST00000201000 566 ntBASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trnp1Q80ZI1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trnp1Q80ZI1 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm24255-201ENSMUST00000104481 128 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Mir7070-201ENSMUST00000183657 86 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm27320-201ENSMUST00000184892 109 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Gm8227-201ENSMUST00000223306 571 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Mir433-201ENSMUST00000093564 124 ntBASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.64■□□□□ 0.09
Trnp1Q80ZI1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Gm10146-201ENSMUST00000072739 309 ntBASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trnp1Q80ZI1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm11618-201ENSMUST00000117946 267 ntBASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm3786-201ENSMUST00000202659 378 ntBASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm10608-202ENSMUST00000213924 676 ntBASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms