Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Skida1Q80YR3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm11854-201ENSMUST00000117839 446 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm8858-201ENSMUST00000118259 342 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm25179-201ENSMUST00000122632 128 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm19791-201ENSMUST00000180398 859 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm18988-201ENSMUST00000205601 746 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm18414-201ENSMUST00000210858 694 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm19137-201ENSMUST00000213790 1164 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Gm37598-201ENSMUST00000194506 1301 ntBASIC14.63□□□□□ -0.07
Skida1Q80YR3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Skida1Q80YR3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm26254-201ENSMUST00000122491 118 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm17258-201ENSMUST00000168462 1266 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm18396-201ENSMUST00000177095 361 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm38320-201ENSMUST00000192767 1281 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm31306-201ENSMUST00000197517 508 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm45889-201ENSMUST00000209535 1057 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.62□□□□□ -0.07
Skida1Q80YR3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Skida1Q80YR3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms