Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc116Q80X53 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc116Q80X53 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 AA543401-201ENSMUST00000164248 1269 ntBASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gm16476-201ENSMUST00000221544 139 ntBASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc116Q80X53 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc116Q80X53 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Gm28630-201ENSMUST00000187806 498 ntBASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc116Q80X53 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms