Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vrk1Q80X41 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.36□□□□□ -0.27
Vrk1Q80X41 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.36□□□□□ -0.27
Vrk1Q80X41 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.36□□□□□ -0.27
Vrk1Q80X41 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vrk1Q80X41 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.36□□□□□ -0.27
Vrk1Q80X41 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.36□□□□□ -0.27
Vrk1Q80X41 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.36□□□□□ -0.27
Vrk1Q80X41 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.36□□□□□ -0.27
Vrk1Q80X41 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vrk1Q80X41 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Gm44608-201ENSMUST00000206827 855 ntBASIC13.35□□□□□ -0.27
Vrk1Q80X41 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.35□□□□□ -0.27
Vrk1Q80X41 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.35□□□□□ -0.27
Vrk1Q80X41 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Carlr-201ENSMUST00000181515 2574 ntBASIC13.35□□□□□ -0.27
Vrk1Q80X41 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vrk1Q80X41 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.34□□□□□ -0.27
Vrk1Q80X41 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.34□□□□□ -0.27
Vrk1Q80X41 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vrk1Q80X41 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms