Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf40bQ80W14 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Prpf40bQ80W14 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.14■□□□□ 0.18
Prpf40bQ80W14 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm15198-201ENSMUST00000117283 177 ntBASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm17420-201ENSMUST00000164753 153 ntBASIC16.14■□□□□ 0.17
Prpf40bQ80W14 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm5354-201ENSMUST00000182417 973 ntBASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.14■□□□□ 0.17
Prpf40bQ80W14 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf40bQ80W14 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf40bQ80W14 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Gm13226-201ENSMUST00000117838 404 ntBASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf40bQ80W14 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms