Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Gm18624-201ENSMUST00000220966 658 ntBASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh19Q80TF3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Gm45668-201ENSMUST00000211271 493 ntBASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.72□□□□□ -0.21
Pcdh19Q80TF3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Gm18905-201ENSMUST00000205454 928 ntBASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Gm6180-201ENSMUST00000065243 498 ntBASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh19Q80TF3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms