Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Mir1897-201ENSMUST00000122581 272 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm10766-202ENSMUST00000194123 606 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm17794-201ENSMUST00000220252 955 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf38bQ80SY5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm13226-201ENSMUST00000117838 404 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm8062-201ENSMUST00000139696 444 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm28911-201ENSMUST00000188837 117 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf38bQ80SY5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Prpf38bQ80SY5 Gm12390-201ENSMUST00000117897 397 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms