Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Gm12350-201ENSMUST00000121208 462 ntBASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm15957-201ENSMUST00000118893 974 ntBASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm17971-201ENSMUST00000190239 806 ntBASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scaf4Q6PFF0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.79□□□□□ -0.2
Scaf4Q6PFF0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scaf4Q6PFF0 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms