Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rad54bQ6PFE3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm11779-201ENSMUST00000118541 368 ntBASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm14494-201ENSMUST00000118786 435 ntBASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.07□□□□□ -0.16
Rad54bQ6PFE3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Gm25287-201ENSMUST00000103846 110 ntBASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Gm22918-201ENSMUST00000103855 110 ntBASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms