Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gm27331-201ENSMUST00000183705 60 ntBASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gm19184-201ENSMUST00000196798 928 ntBASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gm9823-201ENSMUST00000051212 327 ntBASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Snrnp40Q6PE01 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Proscos-202ENSMUST00000178990 666 ntBASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm29705-201ENSMUST00000212598 474 ntBASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm19309-201ENSMUST00000218295 205 ntBASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Snrnp40Q6PE01 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Snrnp40Q6PE01 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms