Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC21.17■□□□□ 0.98
Slx4Q6P1D7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Gm43579-201ENSMUST00000202387 1307 ntBASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC21.16■□□□□ 0.98
Slx4Q6P1D7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Gm38144-201ENSMUST00000192790 465 ntBASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Gm43289-201ENSMUST00000200537 1475 ntBASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slx4Q6P1D7 Gm25668-201ENSMUST00000157700 129 ntBASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 AC022775.2-201ENSMUST00000227885 646 ntBASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Abhd6-203ENSMUST00000225234 1958 ntBASIC21.14■□□□□ 0.98
Slx4Q6P1D7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slx4Q6P1D7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Gm16479-201ENSMUST00000121706 932 ntBASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 CT030182.1-201ENSMUST00000225935 533 ntBASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slx4Q6P1D7 Gm14608-201ENSMUST00000120030 1553 ntBASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Gm37297-201ENSMUST00000192974 2384 ntBASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Gm18244-201ENSMUST00000219747 1566 ntBASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slx4Q6P1D7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC21.12■□□□□ 0.97
Slx4Q6P1D7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms