Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Gm4804-201ENSMUST00000182234 999 ntBASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Gm21470-201ENSMUST00000187680 696 ntBASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.12■□□□□ 0.33
Pdzrn3Q69ZS0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdzrn3Q69ZS0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gm11425-201ENSMUST00000119608 498 ntBASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gm12882-201ENSMUST00000121696 517 ntBASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gm27892-201ENSMUST00000185017 106 ntBASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gm5425-201ENSMUST00000214125 459 ntBASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gm9396-201ENSMUST00000076703 567 ntBASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdzrn3Q69ZS0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdzrn3Q69ZS0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms