Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.57□□□□□ -0.08
Smarcd1Q61466 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Gm5354-201ENSMUST00000182417 973 ntBASIC14.56□□□□□ -0.08
Smarcd1Q61466 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.56□□□□□ -0.08
Smarcd1Q61466 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.56□□□□□ -0.08
Smarcd1Q61466 Gm5279-201ENSMUST00000199575 745 ntBASIC14.56□□□□□ -0.08
Smarcd1Q61466 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.56□□□□□ -0.08
Smarcd1Q61466 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd1Q61466 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd1Q61466 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.55□□□□□ -0.08
Smarcd1Q61466 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Gm37917-201ENSMUST00000194711 392 ntBASIC14.55□□□□□ -0.08
Smarcd1Q61466 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd1Q61466 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Mir698-201ENSMUST00000102164 109 ntBASIC14.54□□□□□ -0.08
Smarcd1Q61466 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.54□□□□□ -0.08
Smarcd1Q61466 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Gm15823-201ENSMUST00000064305 670 ntBASIC14.54□□□□□ -0.08
Smarcd1Q61466 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms