Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm28630-201ENSMUST00000187806 498 ntBASIC13.68□□□□□ -0.22
Vsx2Q61412 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.68□□□□□ -0.22
Vsx2Q61412 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.68□□□□□ -0.22
Vsx2Q61412 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.68□□□□□ -0.22
Vsx2Q61412 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vsx2Q61412 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx2Q61412 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vsx2Q61412 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Gm5566-201ENSMUST00000116118 459 ntBASIC13.67□□□□□ -0.22
Vsx2Q61412 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx2Q61412 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vsx2Q61412 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.66□□□□□ -0.22
Vsx2Q61412 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Vsx2Q61412 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Gm6888-201ENSMUST00000221983 706 ntBASIC13.66□□□□□ -0.22
Vsx2Q61412 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Vsx2Q61412 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx2Q61412 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Vsx2Q61412 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vsx2Q61412 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.65□□□□□ -0.22
Vsx2Q61412 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Vsx2Q61412 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vsx2Q61412 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vsx2Q61412 Gm24543-201ENSMUST00000103867 82 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms