Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.11□□□□□ -0.15
Six4Q61321 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.11□□□□□ -0.15
Six4Q61321 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.11□□□□□ -0.15
Six4Q61321 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Six4Q61321 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Six4Q61321 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Six4Q61321 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Six4Q61321 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Six4Q61321 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.1□□□□□ -0.15
Six4Q61321 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.1□□□□□ -0.15
Six4Q61321 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.1□□□□□ -0.15
Six4Q61321 Syt7-204ENSMUST00000223586 1344 ntBASIC14.1□□□□□ -0.15
Six4Q61321 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Six4Q61321 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six4Q61321 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.09□□□□□ -0.15
Six4Q61321 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Six4Q61321 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Gm14057-201ENSMUST00000120631 482 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.09□□□□□ -0.15
Six4Q61321 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.09□□□□□ -0.15
Six4Q61321 Gm25925-201ENSMUST00000158314 306 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Six4Q61321 Gm24694-201ENSMUST00000180054 110 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Gm8927-201ENSMUST00000181978 981 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Gm4804-201ENSMUST00000182234 999 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Gm27663-201ENSMUST00000184839 110 ntBASIC14.09□□□□□ -0.15
Six4Q61321 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Gm3222-201ENSMUST00000071282 990 ntBASIC14.09□□□□□ -0.15
Six4Q61321 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Six4Q61321 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Six4Q61321 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six4Q61321 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Six4Q61321 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six4Q61321 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six4Q61321 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Six4Q61321 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Six4Q61321 Gm13385-201ENSMUST00000121089 220 ntBASIC14.08□□□□□ -0.16
Six4Q61321 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.08□□□□□ -0.16
Six4Q61321 Gm21854-201ENSMUST00000179901 471 ntBASIC14.08□□□□□ -0.16
Six4Q61321 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms