Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.46□□□□□ -0.25
ClpbQ60649 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.46□□□□□ -0.25
ClpbQ60649 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.46□□□□□ -0.25
ClpbQ60649 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.46□□□□□ -0.25
ClpbQ60649 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.46□□□□□ -0.25
ClpbQ60649 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ClpbQ60649 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.46□□□□□ -0.25
ClpbQ60649 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClpbQ60649 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.46□□□□□ -0.26
ClpbQ60649 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.46□□□□□ -0.26
ClpbQ60649 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClpbQ60649 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.45□□□□□ -0.26
ClpbQ60649 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
ClpbQ60649 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.45□□□□□ -0.26
ClpbQ60649 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.45□□□□□ -0.26
ClpbQ60649 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.45□□□□□ -0.26
ClpbQ60649 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.45□□□□□ -0.26
ClpbQ60649 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.45□□□□□ -0.26
ClpbQ60649 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ClpbQ60649 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ClpbQ60649 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClpbQ60649 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.44□□□□□ -0.26
ClpbQ60649 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ClpbQ60649 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ClpbQ60649 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.44□□□□□ -0.26
ClpbQ60649 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.44□□□□□ -0.26
ClpbQ60649 Gm10275-202ENSMUST00000168697 495 ntBASIC13.44□□□□□ -0.26
ClpbQ60649 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Gm27533-201ENSMUST00000183800 152 ntBASIC13.44□□□□□ -0.26
ClpbQ60649 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Gm38294-201ENSMUST00000192831 381 ntBASIC13.44□□□□□ -0.26
ClpbQ60649 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.44□□□□□ -0.26
ClpbQ60649 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ClpbQ60649 Gm10275-201ENSMUST00000092620 635 ntBASIC13.44□□□□□ -0.26
ClpbQ60649 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ClpbQ60649 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.44□□□□□ -0.26
ClpbQ60649 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms